Supplemental Tables
Table S1 [Figure 2 - supplemental]. Average gene expression and detection in 463 matched pairs of nuclei and cells.
Table S2 [Figure 2 - supplemental]. Differentially expressed genes in cells versus nuclei using intronic plus exonic reads.
Table S3 [Figure 2 - supplemental]. Differentially expressed genes in cells versus nuclei using only exonic reads.
Table S4 [Figure 2 - supplemental]. Gene ontology (GO) enrichment of differentially expressed genes in cells and nuclei.
Table S5 [Figure 4 - supplemental]. Cre-driver line composition of cell clusters.
Table S6 [Figure 5 - supplemental]. Gene properties including the number of clusters with any expression, maximum cluster expression, cell type marker score, and estimated nuclear proportion of transcripts.