References
Kinmonth-Schultz, Hannah A., Greg S. Golembeski, and Takato Imaizumi.
2013. “Circadian Clock-Regulated Physiological Outputs: Dynamic
Responses in Nature”. Seminars in Cell & Developmental Biology24 (5): 407–13. https://doi.org/10.1016/j.semcdb.2013.02.006.
Covington, Michael F., Satchidananda Panda, Xing Liang Liu, Carl A.
Strayer, D. Ry Wagner, and Steve A. Kay. 2001. “ELF3 Modulates
Resetting of the Circadian Clock in Arabidopsis”. The Plant Cell13 (6): 1305. https://doi.org/10.2307/3871297.
Edwards, Kieron D, Ozgur E Akman, Kirsten Knox, Peter J Lumsden, Adrian
W Thomson, Paul E Brown, Alexandra Pokhilko, et al. 2010. “Quantitative
Analysis of Regulatory Flexibility under Changing Environmental
Conditions”. Molecular Systems Biology 6 (November).
https://doi.org/10.1038/msb.2010.81.
Seo, P. J., and P. Mas. 2014. “Multiple Layers of Posttranslational
Regulation Refine Circadian Clock Activity in Arabidopsis”. The
Plant Cell 26 (1): 79–87.
https://doi.org/10.1105/tpc.113.119842.
Michael, T. P., P. A. Salome, and C. R. McClung. 2003. “Two Arabidopsis
Circadian Oscillators Can Be Distinguished by Differential Temperature
Sensitivity”. Proceedings of the National Academy of Sciences100 (11): 6878–83. https://doi.org/10.1073/pnas.1131995100.
Gould, P. D. 2006. “The Molecular Basis of Temperature Compensation in
the Arabidopsis Circadian Clock”. THE PLANT CELL ONLINE 18 (5):
1177–87. https://doi.org/10.1105/tpc.105.039990.
McClung, C. Robertson, and Seth J. Davis. 2010. “Ambient Thermometers
in Plants: From Physiological Outputs towards Mechanisms of Thermal
Sensing”. Current Biology 20 (24): R1086–R1092.
https://doi.org/10.1016/j.cub.2010.10.035.
Salome, P. A., D. Weigel, and C. R. McClung. 2010. “The Role of the
Arabidopsis Morning Loop Components CCA1 LHY PRR7, and PRR9 in
Temperature Compensation”. THE PLANT CELL ONLINE 22 (11):
3650–61. https://doi.org/10.1105/tpc.110.079087.
Mizuno, Takeshi, Yuji Nomoto, Haruka Oka, Miki Kitayama, Aya Takeuchi,
Mayuka Tsubouchi, and Takafumi Yamashino. 2014. “Ambient Temperature
Signal Feeds into the Circadian Clock Transcriptional Circuitry Through
the EC Night-Time Repressor in Arabidopsis Thaliana”. Plant and
Cell Physiology 55 (5): 958–76.
https://doi.org/10.1093/pcp/pcu030.
Mwimba, Musoki, Sargis Karapetyan, Lijing Liu, Jorge Marqués, Erin M.
McGinnis, Nicolas E. Buchler, and Xinnian Dong. 2018. “Daily Humidity
Oscillation Regulates the Circadian Clock to Influence Plant
Physiology”. Nature Communications 9 (1).
https://doi.org/10.1038/s41467-018-06692-2.
Haydon, Michael J., Timothy J. Hearn, Laura J. Bell, Matthew A. Hannah,
and Alex A.R. Webb. 2013. “Metabolic Regulation of Circadian Clocks”.Seminars in Cell & Developmental Biology 24 (5): 414–21.
https://doi.org/10.1016/j.semcdb.2013.03.007.
Hall, Anthony, László Kozma-Bognár, Ruth M. Bastow, Ferenc Nagy, and
Andrew J. Millar. 2002. “Distinct Regulation OfCABandPHYBgene
Expression by Similar Circadian Clocks”. The Plant Journal 32
(4): 529–37. https://doi.org/10.1046/j.1365-313x.2002.01441.x.
Salomé, PA, TP Michael, EV Kearns, AG Fett-Neto, RA Sharrock, and CR
McClung. 2002. “The out of Phase 1 Mutant Defines a Role for PHYB in
Circadian Phase Control in Arabidopsis.”. Plant Physiol 129:
1674–85.
Devlin, PF, and SA Kay. 2000. “Cryptochromes Are Required for
Phytochrome Signaling to the Circadian Clock but Not for Rhythmicity.”.Plant Cell 12: 2499–2510.
Zoltowski, BD, and T Imaizumi. 2014. “Structure and Function of the
ZTL/FKF1/LKP2 Group Proteins in Arabidopsis.”. Enzymes 35:
213–39.
Somers, DE, WY Kim, and R Geng. 2004. “The F-Box Protein ZEITLUPE
Confers Dosage-Dependent Control on the Circadian Clock,
Photomorphogenesis, and Flowering Time.”. Plant Cell 16:
769–82.
Kim, W.-Y. 2005. “Independent Roles for EARLY FLOWERING 3 and ZEITLUPE
in the Control of Circadian Timing Hypocotyl Length, and Flowering
Time”. PLANT PHYSIOLOGY 139 (3): 1557–69.
https://doi.org/10.1104/pp.105.067173.
Legris, Martina, Cornelia Klose, E. Sethe Burgie, Cecilia Costigliolo
Rojas Rojas, Maximiliano Neme, Andreas Hiltbrunner, Philip A. Wigge,
Eberhard Schäfer, Richard D. Vierstra, and Jorge J. Casal. 2016.
“Phytochrome B Integrates Light and Temperature Signals in
Arabidopsis”. Science 354 (6314): 897–900.
https://doi.org/10.1126/science.aaf5656.
Jung, JH, M Domijan, C Klose, S Biswas, D Ezer, M Gao, AK Khattak, et
al. 2016. “Phytochromes Function as Thermosensors in Arabidopsis.”.Science 354: 886–89.
Ezer, D, JH Jung, H Lan, S Biswas, L Gregoire, MS Box, V Charoensawan,
et al. 2017. “The Evening Complex Coordinates Environmental and
Endogenous Signals in Arabidopsis.”. Nat Plants 3: 17087.
Huang, H, S Alvarez, R Bindbeutel, Z Shen, MJ Naldrett, BS Evans, SP
Briggs, LM Hicks, SA Kay, and DA Nusinow. 2016. “Identification of
Evening Complex Associated Proteins in Arabidopsis by Affinity
Purification and Mass Spectrometry.”. Mol Cell Proteomics 15:
201–17.
Davis, AM, J Ronald, Z Ma, AJ Wilkinson, K Philippou, T Shindo, C
Queitsch, and SJ Davis. 2018. “HSP90 Contributes to Entrainment of the
<i>Arabidopsis</i>
Circadian Clock via the Morning Loop.”. Genetics 210: 1383–90.
Grundy, Jack, Claire Stoker, and Isabelle A. Carré. 2015. “Circadian
Regulation of Abiotic Stress Tolerance in Plants”. Frontiers in
Plant Science 6 (August).
https://doi.org/10.3389/fpls.2015.00648.
Cortijo, Sandra, Zeynep Aydin, Sebastian Ahnert, and James Locke. 2018.
“Widespread Inter-Individual Gene Expression Variability in Arabidopsis
Thaliana”, May. https://doi.org/10.1101/335380.
Rugnone, M. L., A. Faigon Soverna, S. E. Sanchez, R. G. Schlaen, C. E.
Hernando, D. K. Seymour, E. Mancini, et al. 2013. “LNK Genes Integrate
Light and Clock Signaling Networks at the Core of the Arabidopsis
Oscillator”. Proceedings of the National Academy of Sciences 110
(29): 12120–25. https://doi.org/10.1073/pnas.1302170110.
Dickinson, PJ, M Kumar, C Martinho, SJ Yoo, H Lan, G Artavanis, V
Charoensawan, et al. 2018. “Chloroplast Signaling Gates Thermotolerance
in Arabidopsis.”. Cell Rep 22: 1657–65.
Michael, TP, G Breton, SP Hazen, H Priest, TC Mockler, SA Kay, and J
Chory. 2008. “A Morning-Specific Phytohormone Gene Expression Program
Underlying Rhythmic Plant Growth.”. PLoS Biol 6: e225.
Ezer, D, SJK Shepherd, A Brestovitsky, P Dickinson, S Cortijo, V
Charoensawan, MS Box, S Biswas, KE Jaeger, and PA Wigge. 2017. “The
G-Box Transcriptional Regulatory Code in Arabidopsis.”. Plant
Physiol 175: 628–40.
Ingle, RA, C Stoker, W Stone, N Adams, R Smith, M Grant, I Carré, LC
Roden, and KJ Denby. 2015. “Jasmonate Signalling Drives Time-of-Day
Differences in Susceptibility of Arabidopsis to the Fungal Pathogen
Botrytis Cinerea.”. Plant J 84: 937–48.
Annunziata, MG, F Apelt, P Carillo, U Krause, R Feil, K Koehl, JE Lunn,
and M Stitt. 2018. “Response of Arabidopsis Primary Metabolism and
Circadian Clock to Low Night Temperature in a Natural Light
Environment.”. J Exp Bot 69: 4881–95.
Ibaraki, Yasuomi. 2016. “Lighting Efficiency in Plant Production Under
Artificial Lighting and Plant Growth Modeling for Evaluating the
Lighting Efficiency”. In LED Lighting for Urban Agriculture ,
151–61. Springer Singapore.
https://doi.org/10.1007/978-981-10-1848-0_11.
Gupta, S. Dutta, and A. Agarwal. 2017. “Artificial Lighting System for
Plant Growth and Development: Chronological Advancement Working
Principles, and Comparative Assessment”. In Light Emitting Diodes
for Agriculture , 1–25. Springer Singapore.
https://doi.org/10.1007/978-981-10-5807-3_1.
Olvera-Gonzalez, Ernesto, Daniel Alaniz-Lumbreras, Rumen
Ivanov-Tsonchev, Jesus Villa-Hernández, Carlos Olvera-Olvera, Efrén
González-Ramírez, Ma Araiza-Esquivel, Vianey Torres-Argüelles, and
Víctor Castaño. 2013. “Intelligent Lighting System for Plant Growth and
Development”. Computers and Electronics in Agriculture 92
(March): 48–53. https://doi.org/10.1016/j.compag.2012.11.012.
Ikeda, M., N. Mitsuda, and M. Ohme-Takagi. 2011. “Arabidopsis HsfB1 and
HsfB2b Act as Repressors of the Expression of Heat-Inducible Hsfs But
Positively Regulate the Acquired Thermotolerance”. PLANT
PHYSIOLOGY 157 (3): 1243–54.
https://doi.org/10.1104/pp.111.179036.
Son, Ora, Yoon-Sun Hur, Yun-Kyung Kim, Hyun-Jung Lee, Sunghan Kim,
Mi-Ran Kim, Kyoung Hee Nam, et al. 2010. “ATHB12 an ABA-Inducible
Homeodomain-Leucine Zipper (HD-Zip) Protein of Arabidopsis, Negatively
Regulates the Growth of the Inflorescence Stem by Decreasing the
Expression of a Gibberellin 20-Oxidase Gene”. Plant and Cell
Physiology 51 (9): 1537–47. https://doi.org/10.1093/pcp/pcq108.
Song, L., S.-s. C. Huang, A. Wise, R. Castanon, J. R. Nery, H. Chen, M.
Watanabe, J. Thomas, Z. Bar-Joseph, and J. R. Ecker. 2016. “A
Transcription Factor Hierarchy Defines an Environmental Stress Response
Network”. Science 354 (6312): aag1550–aag1550.
https://doi.org/10.1126/science.aag1550.
Yanovsky, Marcelo J, M.Agustina Mazzella, and Jorge J Casal. 2000. “A
Quadruple Photoreceptor Mutant Still Keeps Track of Time”.Current Biology 10 (16): 1013–15.
https://doi.org/10.1016/s0960-9822(00)00651-5.
Liu, Tiffany, Jenny Carlsson, Tomomi Takeuchi, Linsey Newton, and Eva M.
Farré. 2013. “Direct Regulation of Abiotic Responses by the Arabidopsis
Circadian Clock Component PRR7”. The Plant Journal , August,
n/a–n/a. https://doi.org/10.1111/tpj.12276.
Yoshida, Takumi, Naohiko Ohama, Jun Nakajima, Satoshi Kidokoro, Junya
Mizoi, Kazuo Nakashima, Kyonoshin Maruyama, et al. 2011. “Arabidopsis
HsfA1 Transcription Factors Function as the Main Positive Regulators in
Heat Shock-Responsive Gene Expression”. Molecular Genetics and
Genomics 286 (5-6): 321–32.
https://doi.org/10.1007/s00438-011-0647-7.
Daszkowska-Golec, Agata. 2016. “The Role of Abscisic Acid in Drought
Stress: How ABA Helps Plants to Cope with Drought Stress”. InDrought Stress Tolerance in Plants Vol 2 , 123–51. Springer
International Publishing.
https://doi.org/10.1007/978-3-319-32423-4_5.
O’Malley, Ronan C., Shao-shan Carol Huang, Liang Song, Mathew G. Lewsey,
Anna Bartlett, Joseph R. Nery, Mary Galli, Andrea Gallavotti, and
Joseph R. Ecker. 2016. “Cistrome and Epicistrome Features Shape the
Regulatory DNA Landscape”. Cell 165 (5): 1280–92.
https://doi.org/10.1016/j.cell.2016.04.038.
Chen, Yi-Shih, Yi-Chi Chao, Tzu-Wei Tseng, Chun-Kai Huang, Pei-Ching Lo,
and Chung-An Lu. 2016. “Two MYB-Related Transcription Factors Play
Opposite Roles in Sugar Signaling in Arabidopsis”. Plant
Molecular Biology 93 (3): 299–311.
https://doi.org/10.1007/s11103-016-0562-8.
Nicholson, Joshua M, Joana C Macedo, Aaron J Mattingly, Darawalee
Wangsa, Jordi Camps, Vera Lima, Ana M Gomes, et al. 2015. “Chromosome
Mis-Segregation and Cytokinesis Failure in Trisomic Human Cells”.ELife 4 (May). https://doi.org/10.7554/elife.05068.