Table 4. A comparison between DADA2 and MAUI-seq for a subset
of the Field-Samples-2 data summarised in Table 3: the rpoB
sequences from samples amplified by Phusion (proofreading) polymerase.
Red cells refer to rejected sequences. Green cells refer to sequences,
which are accepted by MAUI-seq, while DADA2 rejects them as potential
chimeras. Yellow cells refer to sequences filtered out due to low UMI
count by MAUI-seq. |
Table 4. A comparison between DADA2 and
MAUI-seq for a subset of the Field-Samples-2 data summarised in Table 3:
the rpoB sequences from samples amplified by Phusion
(proofreading) polymerase. Red cells refer to rejected sequences. Green
cells refer to sequences, which are accepted by MAUI-seq, while DADA2
rejects them as potential chimeras. Yellow cells refer to sequences
filtered out due to low UMI count by MAUI-seq. |
Table 4. A
comparison between DADA2 and MAUI-seq for a subset of the
Field-Samples-2 data summarised in Table 3: the rpoB sequences
from samples amplified by Phusion (proofreading) polymerase. Red cells
refer to rejected sequences. Green cells refer to sequences, which are
accepted by MAUI-seq, while DADA2 rejects them as potential chimeras.
Yellow cells refer to sequences filtered out due to low UMI count by
MAUI-seq. |
Table 4. A comparison between DADA2 and MAUI-seq
for a subset of the Field-Samples-2 data summarised in Table 3: the
rpoB sequences from samples amplified by Phusion (proofreading)
polymerase. Red cells refer to rejected sequences. Green cells refer to
sequences, which are accepted by MAUI-seq, while DADA2 rejects them as
potential chimeras. Yellow cells refer to sequences filtered out due to
low UMI count by MAUI-seq. |
Table 4. A comparison between
DADA2 and MAUI-seq for a subset of the Field-Samples-2 data summarised
in Table 3: the rpoB sequences from samples amplified by Phusion
(proofreading) polymerase. Red cells refer to rejected sequences. Green
cells refer to sequences, which are accepted by MAUI-seq, while DADA2
rejects them as potential chimeras. Yellow cells refer to sequences
filtered out due to low UMI count by MAUI-seq. |
Table 4. A
comparison between DADA2 and MAUI-seq for a subset of the
Field-Samples-2 data summarised in Table 3: the rpoB sequences
from samples amplified by Phusion (proofreading) polymerase. Red cells
refer to rejected sequences. Green cells refer to sequences, which are
accepted by MAUI-seq, while DADA2 rejects them as potential chimeras.
Yellow cells refer to sequences filtered out due to low UMI count by
MAUI-seq. |
Table 4. A comparison between DADA2 and MAUI-seq
for a subset of the Field-Samples-2 data summarised in Table 3: the
rpoB sequences from samples amplified by Phusion (proofreading)
polymerase. Red cells refer to rejected sequences. Green cells refer to
sequences, which are accepted by MAUI-seq, while DADA2 rejects them as
potential chimeras. Yellow cells refer to sequences filtered out due to
low UMI count by MAUI-seq. |
Table 4. A comparison between
DADA2 and MAUI-seq for a subset of the Field-Samples-2 data summarised
in Table 3: the rpoB sequences from samples amplified by Phusion
(proofreading) polymerase. Red cells refer to rejected sequences. Green
cells refer to sequences, which are accepted by MAUI-seq, while DADA2
rejects them as potential chimeras. Yellow cells refer to sequences
filtered out due to low UMI count by MAUI-seq. |
Table 4. A
comparison between DADA2 and MAUI-seq for a subset of the
Field-Samples-2 data summarised in Table 3: the rpoB sequences
from samples amplified by Phusion (proofreading) polymerase. Red cells
refer to rejected sequences. Green cells refer to sequences, which are
accepted by MAUI-seq, while DADA2 rejects them as potential chimeras.
Yellow cells refer to sequences filtered out due to low UMI count by
MAUI-seq. |