Alpha diversity | Factor | Df | SS | MS | F-value | P-value |
Chao1 | Cross | 7 | 14345 | 2049 | 1.88 | 0.080 |
Sire | 56 | 61401 | 1096 | 1.00 | 0.48 | |
Pen | 43 | 72081 | 1676 | 1.54 | 0.038 | |
Residuals | 113 | 123390 | 1092 | | | |
Shannon | Cross | 7 | 5.99 | 0.86 | 1.14 | 0.34 |
Sire | 56 | 32.0 | 0.57 | 0.76 | 0.87 | |
Pen | 43 | 25.2 | 0.59 | 0.78 | 0.82 | |
Residuals | 113 | 85.0 | 0.75 | | |
Distance metric | Factor | Df | SS | MS | Pseudo-F | R2 | P-value |
Bray-Curtis | Cross | 7 | 4.10 | 0.59 | 1.74 | 0.05 | 0.0025 |
Sire | 56 | 20.0 | 0.36 | 1.06 | 0.26 | 0.23 | |
Pen | 43 | 13.6 | 0.32 | 0.94 | 0.18 | 0.76 | |
Residuals | 114 | 38.4 | 0.34 | | 0.50 | | |
Total | 220 | 76.1 | | | 1.00 | | |
Jaccard | Cross | 7 | 4.06 | 0.58 | 1.55 | 0.05 | 0.00040 |
Sire | 56 | 22.2 | 0.40 | 1.06 | 0.26 | 0.065 | |
Pen | 43 | 16.4 | 0.38 | 1.02 | 0.19 | 0.31 | |
Residuals | 114 | 42.7 | 0.37 | | 0.50 | | |
Total | 220 | 85.4 | | 1.00 | |
Distance-metric | Cross | BQ | CAP | CHILL | NIT | PUNT | QUIN | RC |
Bray-Curtis | CAP | 0.86 | ||||||
CHILL | 0.12 | 0.047 | ||||||
NIT | 0.71 | 0.79 | 0.20 | |||||
PUNT | 0.86 | 0.86 | 0.19 | 0.86 | ||||
QUIN | 0.86 | 0.86 | 0.19 | 0.86 | 0.86 | |||
RC | 0.86 | 0.86 | 0.19 | 0.86 | 0.86 | 0.86 | ||
YIAL | 0.0028 | 0.0028 | 0.66 | 0.017 | 0.017 | 0.0056 | 0.017 | |
Jaccard | CAP | 0.63 | ||||||
CHILL | 0.040 | 0.029 | ||||||
NIT | 0.52 | 0.41 | 0.17 | |||||
PUNT | 0.63 | 0.52 | 0.10 | 0.65 | ||||
QUIN | 0.63 | 0.41 | 0.079 | 0.70 | 0.65 | |||
RC | 0.78 | 0.70 | 0.11 | 0.78 | 0.52 | 0.63 | ||
YIAL | 0.0021 | 0.0021 | 0.22 | 0.0047 | 0.0021 | 0.0021 | 0.0047 |