Species Primer Sequence Length PCR Fragment (bp) Assay Type
Cop_siv_16S_P 5’-AACTATTCGCCTCAC-3’ 199
C. sivickisi Cop_siv_16S_F 5’-CTGTCGAGCTTAATTGGTATC-3’ TaqMan
Cop_siv_16S_R 5’-CACAATTATGGGGCGGAA-3’
C. fleckeri Chi_flec_16S_F 5’-GACTGTTTACCAAAAACATA-3’ 180 SYBR
Chi_flec_16S_R 5’-CGATTCAATATCACTGGGAGGCAAG-3’
C. xaymacana Car_xay_16S_F 5’-TCTATCTGTTGCAACAAAGGTCC-3’ 127 SYBR
Car_xay_16S_R 5’-GACCCACAGATTTCGTGACTG-3’
C. barnesi Car_bar_16S_F 5’-TGAGGCCTGCTCACTGATTC-3’ 280 SYBR
Car_bar_16S_R 5’-CTTCTTTCCCCGATCAAACCAAC-3’