Gene set Number Average transcript length(bp) Average CDS length(bp) Average exons per gene Average exon length(bp) Average intron length(bp)
De novo Augustus 44,493 5,661.67 884.59 3.59 246.65 1,847.03
GlimmerHMM 142,367 5,202.15 507.15 2.50 202.98 3,133.17
SNAP 77,306 11,939.92 686.97 3.91 175.53 3,862.21
Geneid 28,958 20,269.88 746.01 5.01 148.93 4,869.99
Genscan 39,969 14,596.29 1,372.20 4.97 275.99 3,329.43
Homology Cel 8,768 2,761.53 803.49 2.55 315.45 1,265.61
Cgi 29,696 2,040.56 787.48 1.98 397.52 1,277.38
Dme 10,815 4,260.04 891.58 3.24 275.13 1,503.38
Dpu 31,971 2,131.13 571.79 2.04 279.70 1,493.25
Hsa 13,798 3,503.53 869.14 2.86 303.93 1,416.63
Isc 47,137 1,287.92 567.46 1.58 360.28 1,252.86
Ptep 23,660 2,639.54 836.84 2.27 368.69 1,419.70
Pva 26,412 3,766.29 935.76 3.10 302.06 1,349.24
Spu 15,073 2,878.81 1,023.85 2.39 428.30 1,334.03
Tca 22,091 3,009.75 981.52 2.51 390.59 1,340.60
Tur 18,806 2,754.58 914.90 2.20 416.34 1,536.27
RNAseq PASA 44,920 13,768.62 1,389.51 6.28 221.40 2,346.33
Cufflinks 56,571 18,303.84 3,099.64 6.63 467.53 2,700.67
EVM EVM 23,993 8,599.08 1,147.41 4.49 255.33 2,132.77
Pasa-update* Pasa-update* 23,395 9,475.94 1,219.26 4.76 256.30 2,197.63
Final set* Final set* 19,981 10,484.05 1,231.18 5.22 236.02 2,194.55