Figure Legend
Figure 1. Time-calibrated maximum likelihood phylogeny of
Coleoptera, estimated with Drosophila melanogaster (Dmel) as
outgroup. The branches are labeled with the number of rapid gene family
expansions (yellow boxes) and contractions (blue boxes), or labeled zero
if no change was estimated. Topological relationships were estimated in
RAxML using 379,463 amino acid residues from 1,013 orthologous genes.
All nodes have 100% bootstrap support, and nodes that were used to
time-calibrate the tree are labeled with stars.
Figure 2 . CirGO plot showing semantic clustering of GO terms
for all expanding gene families in the Nebria riversi branch.
Figure 3. A) 16S rRNA phylogeny of Spiroplasma isolates,
showing the placement of S . sp. NR in the Carabid clade. B)
Schematic showing metabolic functions of S . sp. NR.
Table 1 . Genome statistics for Nebria riversi (bold
type) and eleven Coleoptera species in RefSeq.