Figure 3- GWA analysis reveals candidate genes underlying
natural variation in DF circadian phenotypes
Manhattan plots show AMM derived SNP associations with period (top
panel), phase (middle panel) and RAE (bottom panel). Data shown has
>5% MAF and reflects the 10,000 highest –log10(p) values.
Gene candidates selected for further analysis are labelled in red with
arrows. The red dotted line indicates the 6.5 –log10(p) arbitrary
threshold used for this study. Vertical grey lines are labelled under
the x axis and represent positions of known circadian and flowering time
genes with altered circadian phenotypes previously reported in mutants.