Fig. 1: k-mer (K=17) distribution of Illumina genome sequencing reads of Metopolophium dirhodum (A) and Hi-C contact heat map of the assembled genome (B)
Fig. 2: Maximum likelihood phylogeny of Metopolophium dirhodum and nine other aphid species based on a concatenated alignment of the conserved single copy orthologues. The histograms are subdivided to represent different categories of orthology: 1:1:1 (single copy orthologous genes in communal gene families); N:N:N (multiple copy orthologous genes in communal gene families); specific (genes from unique gene families from each species); other (genes that do not belong to any of the abovementioned orthologous categories); uncluster (genes that do not cluster to any families)