Fig. 1: k-mer (K=17) distribution of Illumina genome
sequencing reads of Metopolophium dirhodum (A) and Hi-C contact
heat map of the assembled genome (B)
Fig. 2: Maximum likelihood phylogeny of Metopolophium
dirhodum and nine other aphid species based on a concatenated alignment
of the conserved single copy orthologues. The histograms are subdivided
to represent different categories of orthology: 1:1:1 (single copy
orthologous genes in communal gene families); N:N:N (multiple copy
orthologous genes in communal gene families); specific (genes from
unique gene families from each species); other (genes that do not belong
to any of the abovementioned orthologous categories); uncluster (genes
that do not cluster to any families)