3.2.4 BFD* implemented in SNAPP
In all cases, BFD* delimited more putative species than the single-locus
ASAP analysis (Fig. 2; Dryad file S54). BFD* analyses supported the most
divisive species delimitation models in two of the three subclades –
clades ‘1’ and ‘3’, and the intermediate species delimitation model for
‘Clade 2’. Marginal likelihood values across each of the four
independent runs were largely consistent but slightly more
variable with an increasing number of species.