2.10 | Identification of detoxification-related gene
families
Seven detoxification-related gene families of four roundworms were
identified by the HMMER3 (http://hmmer.janelia.org/) software, including
ABC domain (PF00005), Cytochrome P450 (CYP ) domain (PF00067), GST
domain (PF00045), CHIA domain (PF00704), PTCHD domain (PF02460) and PTP
domain (PF00782). The domain file is used as first template for scanning
the gene family, the output genes were filtered out with E-value lower
than 1e-10, then the filtered genes were used as
second template for scanning the gene family. Again, the second output
genes were filtered out with E-value lower than 1e-10.