Genome synteny
Using the B. l. tsinlingensis genome as a reference assembly, 6
other salmonids (O. mykiss , O. tshawytscha , S.
trutta , O. kisutch , O. nerka , and O. keta ) were
aligned to the B. l. tsinlingensis genome using LAST (“lastal”
command in LAST with -P 5 -m100 -E 0.05; v802)
(Kielbasa et al. 2011). The
one-to-one aligned sequences were then selected and used for plotting
with Circos (v0.69-6) (Krzywinski et
al. 2009).