Region
|
Length
|
Ancestral variants
|
Omicron BA.2-like
|
Omicron BA.2-like
|
Other Omicrons
|
Other Omicrons
|
|
|
|
Diff |
FDR |
Diff |
FDR |
NSP4
|
1500
|
962
|
464
|
< 0.0001
|
1
|
0.1127
|
Spike
|
3822
|
709
|
21
|
< 0.0001
|
20
|
< 0.0001
|
NSP15
|
1038
|
376
|
21
|
< 0.0001
|
11
|
< 0.0001
|
NSP9
|
339
|
1518
|
6
|
< 0.0001
|
7
|
< 0.0001
|
NSP3
|
5835
|
467
|
4
|
< 0.0001
|
0
|
0.7554
|
NSP6
|
870
|
1162
|
3
|
< 0.0001
|
-3
|
< 0.0001
|
NSP12
|
2769
|
356
|
1
|
0.1789
|
2
|
< 0.0001
|
NSP14
|
1581
|
1781
|
1
|
0.8104
|
2
|
0.0129
|
N
|
1260
|
683
|
1
|
0.4540
|
-1
|
0.0123
|
NS7a
|
366
|
223
|
0
|
0.5782
|
0
|
0.0458
|
NSP13
|
1803
|
1659
|
0
|
< 0.0001
|
0
|
< 0.0001
|
NS9b
|
294
|
444
|
0
|
0.9704
|
-4
|
0.0040
|
E
|
228
|
2338
|
-2
|
0.1030
|
-2
|
0.0486
|
NSP2
|
1914
|
455
|
-5
|
0.3511
|
3
|
0.0015
|
NS9c
|
222
|
2474
|
-5
|
0.1000
|
-7
|
0.0166
|
NS3
|
828
|
243
|
-5
|
< 0.0001
|
0
|
0.0002
|
NSP1
|
540
|
498
|
-7
|
< 0.0001
|
-4
|
0.0001
|
3P
|
370
|
188
|
-9
|
< 0.0001
|
0
|
0.9165
|
RNA
|
29903
|
744
|
27
|
< 0.0001
|
3
|
< 0.0001
|