Bacterial 16S rRNA gene |
349F |
AGG CAG CAG
TDR GGA AT |
~460 |
(Takai & Horikoshi, 2000) |
|
806R |
GGA CTA CYV GGG TAT CTA AT |
|
|
ITS |
ITS3 |
CAH CGA TGA AGA ACG YRG |
~430 |
(Frey et
al., 2016; Tedersoo et al.,
2014) |
|
ITS4 |
TCC TSC GCT TAT TGA TAT GC |
|
|
mcrA
|
ML-F(mcrA)32 |
GGT GGT GTM GGA
TTC ACA CAR TAY GCW ACA GC |
~476 |
(Luton et al., 2002) |
|
ML-R(mcrA)23 |
TTC ATT GCR TAG TTW GGR TAG TT |
|
|
pmoA
|
A189F |
GGN GAC TGG GAC TTC TGG |
~532 |
(Holmes
et al., 1995) |
|
A682r |
GAA SGC NGA GAA GAA SGC |
|
|
nifH
|
PolF_115 |
TGC GAY CCS AAR GCB
GAC TC |
~362 |
(Poly et al., 2001) |
|
PolR_457 |
ATS GCC ATC ATY TCR CCG GA |
|
|
nosZ
|
nosZ-1F |
WCS YTG TTC MTC GAC
AGC CAG |
~249 |
(Henry et al., 2006) |
|
nosZ_1R |
ATG TCG ATC ARC TGV KCR TTY TC |
|
|
archaeal amoA |
Arch-amoAF |
CTG AYT GGG CYT GGA CAT C |
~635 |
(Francis et al.,
2005) |
|
Arch-amoAR |
TTC TTC TTT GTT GCC CAG TA |
|
|
bacterial amoA |
amoA-1F |
GGG GHT TYT ACT GGT GGT |
~491 |
(Rotthauwe et al.,
1997) |
|
amoA-2R |
CCC CTC KGS AAA GCC TTC TTC |
|
|
nirS |
cd3AF |
GTS AAC GTS AAG GAR ACS GG |
~425 |
(Throback et al., 2004) |
|
R3cd |
GAS TTC GGR TGS GTC TTG A |
|
|
nirK |
nirK_F1aCu |
ATC ATG GTS CTG CCG CG |
~473 |
(Hallin &
Lindgren, 1999) |
|
nirK_R3Cu |
GCC TCG ATC AGR TTG TGG TT |
|
|
nxrB |
nxrB169f |
TAC ATG TGG TGG AAC A |
~485 |
(Pester et al., 2014) |
|
nxrB638r |
CGG TTC TGG TCR ATC A |
|
|
norB |
qnorB2F |
GGN CAY CAR GGN TAY GA |
~260 |
(Braker & Tiedje, 2003) |
|
qnorB5R |
ACC CAN AGR TGN ACN ACC CAC CA |
|
|
phoD
|
phoD-F733
|
TGG GAY GAT CAY GAR GT
|
~363
|
(Ragot et al., 2015)
|
|
phoD-R1083 |
CTG SGC SAK SAC RTT CCA |
|
|